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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs56114371 chr6:27274834 C/T ZFP57 chr6:29640169-29648887:- 0.83 7.73 6.46E-14 Box Plot
THCA rs56127968 chr14:39892757 A/C LOC647288 chr13:75811890-75814517:- 0.41 7.5 3.16E-13 Box Plot
THCA rs56131013 chr6:28320677 G/A ZFP57 chr6:29640169-29648887:- 0.37 5.91 6.56E-9 Box Plot
THCA rs56134963 chr6:151710081 T/C NEK5 chr13:52607747-52703214:- 0.58 6.57 1.31E-10 Box Plot
THCA rs56145077 chr10:45939991 C/T AGAP8 chr10:51224681-51371321:- 0.39 6.09 2.34E-9 Box Plot
THCA rs56162050 chr1:80485934 G/A PAX2 chr10:102495360-102589698:+ -0.34 -5.91 6.52E-9 Box Plot
THCA rs56162094 chr8:3242483 AAT/A CSMD1 chr8:2792875-4852494:- -0.33 -6.49 2.12E-10 Box Plot
THCA rs56168814 chr2:101063978 G/A LOC285359 chr3:101431278-101432259:+ 0.35 5.9 6.72E-9 Box Plot
THCA rs56174441 chr2:132196646 G/A CCDC74B chr2:130896860-130902707:- 0.37 6.55 1.49E-10 Box Plot
THCA rs56176437 chr15:30923740 A/G CHRNA7 chr15:32215641-32465219:+ 0.28 6.65 8.06E-11 Box Plot
THCA rs56177149 chr8:11247298 G/A SGK223 chr8:8175258-8244008:- -0.41 -7.46 4.08E-13 Box Plot
THCA rs56189111 chr6:28271973 C/A BTN3A2 chr6:26365387-26378548:+ -0.82 -11.75 3.4E-28 Box Plot
THCA rs56189111 chr6:28271973 C/A RNF5P1 chr8:38458179-38458718:- 0.7 6.25 8.95E-10 Box Plot
THCA rs56189111 chr6:28271973 C/A ZFP57 chr6:29640169-29648887:- 0.92 8.87 1.45E-17 Box Plot
THCA rs56191269 chr17:18205750 TGGAGAGTGAA/T LOC162632 chr17:16614993-16707819:+ 0.37 5.97 4.57E-9 Box Plot